Detailed information of evm.model.contig_17228.2 in Platygyra sinensis

Genomic Location: contig_17228:19126...34145
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →		ubiquitinUbiquitin familyDomainInterproscan
PF12756
all species →		zf-C2H2_2C2H2 type zinc-finger (2 copies)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR040048
all species →		FamilyZinc finger protein 277Interproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR041661
all species →		DomainZN622/Rei1/Reh1, zinc finger C2H2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13267
all species →		ZINC FINGER PROTEIN 277Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_17228.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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