Gene detail

Detailed information of evm.model.contig_18554.2 in Platygyra sinensis

Genomic Location: contig_18554:12765...20073
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00112 all species →	Peptidase_C1	Papain family cysteine protease	Domain	Interproscan
PF08773 all species →	CathepsinC_exc	Cathepsin C exclusion domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013128 all species →	Family	Peptidase C1A	Interproscan
IPR000668 all species →	Domain	Peptidase C1A, papain C-terminal	Interproscan
IPR025660 all species →	Active_site	Cysteine peptidase, histidine active site	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR039412 all species →	Domain	Cathepsin C	Interproscan
IPR036496 all species →	Homologous_superfamily	Cathepsin C, exclusion domain superfamily	Interproscan
IPR014882 all species →	Domain	Cathepsin C exclusion	Interproscan
IPR000169 all species →	Active_site	Cysteine peptidase, cysteine active site	Interproscan
IPR025661 all species →	Active_site	Cysteine peptidase, asparagine active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12411 all species →	CYSTEINE PROTEASE FAMILY C1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0008234 all species →	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_18554.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.