Detailed information of evm.model.contig_18852.3 in Platygyra sinensis

Genomic Location: contig_18852:78247...82627
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01122
all species →		Cobalamin_bindEukaryotic cobalamin-binding proteinRepeatInterproscan
PF14478
all species →		DUF4430Domain of unknown function (DUF4430)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002157
all species →		FamilyCobalamin (vitamin B12)-binding proteinInterproscan
IPR008930
all species →		Homologous_superfamilyTerpenoid cyclases/protein prenyltransferase alpha-alpha toroidInterproscan
IPR027954
all species →		DomainTranscobalamin-like, C-terminal domainInterproscan
IPR051588
all species →		FamilyEukaryotic Cobalamin TransportInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10559
all species →		TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015889
all species →		Biological Processcobalamin transportInterproscan
GO:0031419
all species →		Molecular Functioncobalamin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06716ART1, CD296; ADP-ribosyltransferase 1EC:2.4.2.31
Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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