Detailed information of evm.model.contig_19353.7 in Platygyra sinensis

Genomic Location: contig_19353:66336...73047
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003459 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for evm.model.contig_19353.7 in Platygyra sinensis.
 InterPro
InterPro termTypeDescriptionSource
IPR039762
all species →		FamilyNonsense-mediated mRNA decay protein Nmd2/UPF2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12839
all species →		NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000184
all species →		Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005844
all species →		Cellular Componentobsolete polysomeInterproscan
GO:0035145
all species →		Cellular Componentexon-exon junction complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_19353.7.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP