Detailed information of evm.model.contig_19585.7 in Platygyra sinensis

Genomic Location: contig_19585:41010...63989
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
No Pfam domain signature was detected for evm.model.contig_19585.7. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR026054
all species →		FamilyNuclear pore complex proteinInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23193
all species →		NUCLEAR PORE COMPLEX PROTEIN NUPInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0006405
all species →		Biological ProcessRNA export from nucleusInterproscan
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan
GO:0008139
all species →		Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14317NUP214, CAN; nuclear pore complex protein Nup214-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP