Detailed information of evm.model.contig_20243.1 in Platygyra sinensis

Genomic Location: contig_20243:6863...17439
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09431
all species →		SPIN90_LRDSPIN90/Ldb17, leucine-rich domainDomainInterproscan
PF10288
all species →		CTU2Cytoplasmic tRNA 2-thiolation protein 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018556
all species →		DomainSPIN90/Ldb17, leucine-rich domainInterproscan
IPR030125
all species →		FamilySPIN90/Ldb17Interproscan
IPR019407
all species →		FamilyCytoplasmic tRNA 2-thiolation protein 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13357
all species →		SH3 ADAPTER PROTEIN SPIN90 NCK INTERACTING PROTEIN WITH SH3 DOMAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006897
all species →		Biological ProcessendocytosisInterproscan
GO:0071933
all species →		Molecular FunctionArp2/3 complex bindingInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0002098
all species →		Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0034227
all species →		Biological ProcesstRNA thio-modificationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_20243.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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