Gene detail

Detailed information of evm.model.contig_20289.9 in Platygyra sinensis

Genomic Location: contig_20289:49810...50379
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01056 all species →	Myc_N	Myc amino-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002418 all species →	Family	Transcription regulator Myc	Interproscan
IPR050433 all species →	Family	Myc family transcription factors	Interproscan
IPR012682 all species →	Domain	Transcription regulator Myc, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45851 all species →	MYC PROTO-ONCOGENE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_20289.9.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.