Detailed information of evm.model.contig_20630.4 in Platygyra sinensis

Genomic Location: contig_20630:18203...25400
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02762
all species →
Cbl_N3CBL proto-oncogene N-terminus, SH2-like domainDomainInterproscan
PF02262
all species →
Cbl_NCBL proto-oncogene N-terminal domain 1DomainInterproscan
PF13920
all species →
zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF02761
all species →
Cbl_N2CBL proto-oncogene N-terminus, EF hand-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014742
all species →
DomainAdaptor protein Cbl, SH2-like domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036537
all species →
Homologous_superfamilyAdaptor protein Cbl, N-terminal domain superfamilyInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR003153
all species →
DomainAdaptor protein Cbl, N-terminal helicalInterproscan
IPR024159
all species →
DomainAdaptor protein Cbl, PTB domainInterproscan
IPR036860
all species →
Homologous_superfamilySH2 domain superfamilyInterproscan
IPR024162
all species →
FamilyAdaptor protein CblInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan
IPR014741
all species →
DomainAdaptor protein Cbl, EF hand-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23007
all species →
CBLInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007166
all species →
Biological Processcell surface receptor signaling pathwayInterproscan
GO:0001784
all species →
Molecular Functionphosphotyrosine residue bindingInterproscan
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan
GO:0007175
all species →
Biological Processnegative regulation of epidermal growth factor-activated receptor activityInterproscan
GO:0017124
all species →
Molecular FunctionSH3 domain bindingInterproscan
GO:0023051
all species →
Biological Processregulation of signalingInterproscan
GO:0030971
all species →
Molecular Functionreceptor tyrosine kinase bindingInterproscan
GO:0045121
all species →
Cellular Componentmembrane raftInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_20630.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP