Detailed information of evm.model.contig_21408.1 in Platygyra sinensis

Genomic Location: contig_21408:1739...8228
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008464 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR042477
all species →		FamilyHMG domain-containing protein 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46584
all species →		HMG DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
No Gene Ontology signature was recorded for evm.model.contig_21408.1 in Platygyra sinensis.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11298HMGXB4, HMG2L1; HMG domain-containing protein 4-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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