Detailed information of evm.model.contig_21655.2 in Platygyra sinensis

Genomic Location: contig_21655:7555...9966
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00077
all species →		RVPRetroviral aspartyl proteaseDomainInterproscan
PF17919
all species →		RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR018061
all species →		DomainRetropepsinsInterproscan
IPR021109
all species →		Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951
all species →		FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577
all species →		DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984
all species →		PROTEIN CBG26694Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.contig_21655.2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_21655.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP