Gene detail

Detailed information of evm.model.contig_21884.3 in Platygyra sinensis

Genomic Location: contig_21884:19692...20357
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09032 all species →	Siah-Interact_N	Siah interacting protein, N terminal	Domain	Interproscan
PF04969 all species →	CS	CS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015120 all species →	Domain	Siah interacting protein, N-terminal	Interproscan
IPR007699 all species →	Domain	SGS domain	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan
IPR052289 all species →	Family	Calcyclin-binding ubiquitin ligase bridge	Interproscan
IPR037893 all species →	Domain	Calcyclin-binding Protein, CS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13164 all species →	CALICYLIN BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan
GO:0031625 all species →	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0044548 all species →	Molecular Function	S100 protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04507	CACYBP, SIP; calcyclin binding protein	-	Wnt signaling pathway	ko04310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.