Gene detail

Detailed information of evm.model.contig_22668.2 in Platygyra sinensis

Genomic Location: contig_22668:7136...36369
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_22668.2

ATGATGGCAACACGAAATCCGAAGGTCTCCCCTAAACGAAAGCCTTCGAAGCCGCAAGCAAGGGCCTCCACGTTATCCAAGGAACAAGGCACTTTAAAGCCTATTTTTTCACTTGGATGTACTTCACTGTTTTATCAAGTGTACTACAATACTGGAACAAAGTTTTCTTTAAACTTGTTAGCATGGACAGACACAGATGACACAGAGGGAACTAAAGAATCCGGAGAGTCTTCAGATCAAACCAAAGACACAGCAACTCCAGGAGAACTACAGAAAGGAAGCTTGATATCTGTCAGGGAAGCAGATGAAGCTAACAGAGGTGATGAGGCAGAGGATGAAATTAATCAGGCTGAAATGAATGGTGTTCATGAGGCGCCGCAGACAACTGACACAGAGGTTCCTCAAACAACAGACACTGAAGGAGTTAATGGAACTGAGACAGATTCTCTTGGAAGCATGGAGAGTGGTGCAAGACGGAGAGTTAAAAGAAACACAGTTGTACCTACAGATGGTGAAGACAGTGGTCGGCAAACCCCTGATGTTGAATCTAGAAAAGATGCATGGAGTATTGCTGAAACTGATGCTGATGTTGAATCCAATGCTGCTTCAAGCCGACCAAGCTCAGCTCATAACAGGGTAAGACAGCGCCCTGCCACTGCAGTGGCAAGACAGCCAATCCCTGTTGCATCTGTAGAGAGGCCAATGACGGCACCAACCATTGATTACCATTCTTCATCAAGACTTCATGGGACAAGTGGAAGCTCACGACCTAAATCGACAGGTTCCCGCCCAAGATCAAGAGGTGAAGAAGGATTAAATCGTCCTGTGTCCTCAACTTCAGGAGCATTGGCAATAACTGATGGGGGAATTATGGCCTGGGAAGAACCATCACCAGATTCTAGTGAAGGGATAAGAGATAGAGAAAGCTCCTCTAGTCGAAGCAGTGATCTTTTGGCACCTCCTCAGTTACAAGGAGAACAGAATGCTTATATTCCTTACATTTATGCAAAAGATTGTATTCAGAGGGTAATGGATGATATGAAGAAAATGAAAAGCAGTCATGTGAAGGTTGTTGATCAGATTCAAGATCAATACAAATCACTGGAGGATGATATCCAGGCAAAATTCAACACTTTTGTTCTTAACTTGCGCAATGAATATTCCAACAAAGTCACCACGTTCCGACAAGTTATAACCATTCATCGTGAGGATTCATTCCGTACTAACACTTATTGGCAAGAAACAGTGAAGAGCCTCCAAAGCAAGAACCAGGTTCTGCTAAATGAAAAGAGACAACTTCTTATTAAAAACAGGGAAGAATTTACCAAGCTTGAACATGACAAGGTAACAGCTGTGAAAGATTTAACCAGGATGCTGGATGAACGACATGCTAAATACACCTTATTGTTGGCAGATTTTAAAGGTGAACAAGAAAAAGTGAGAGAACTTGAGGAAAAGTTGAAAGCTTTAGAAGAACAAGGTTTGAAACAACAGGAAGAGAACCAAACTTCCCATGAAGCTGAAATCCAAGCGTTAAAAGCAAAACATGAAGAGGAAGTCAATGAGTTAAAACAACAGTTAGAACTTGTTGAAAAAGAAAAGCAGGAGAAAGATGAAGCACATCAGAAGGAGTTAAAAGAAAGAGAAGAAGAGGAAACAAAGAAAATAAATGAGTTAACAGAGAAACACACAAATGAAGTAGAGACACTCAAGGCTGAAATTCAGAAACTTCAAGAAGAGATTGATGCTCTAAAGGCAAGTGGAGCAACAGTTGGGACAACTACTGTGATAACAACAACTGCAGTTACATCAGAAGTTGCTGAACCACAGACAACACTAATACCAAAAGAAGACAGACAAGAAGAGGTGAAAGAACAAGCAGAAGTAGTGGTTACAGAGCAAGCTGCTCCAGTAGCTGCTACTGCTGCTGCTGCTGCTGCCACCACTACTGTTACAGTGTTAGACAATGCTGAAAAGGAGCAGCTTACCCAAGAGATTGCAAAACTTCAAGAAGAGATAGAAAAGAACAAAGCAGAAGCAGCCAAAACTAAAGAGGAACTTGAGAAAGAAAAAGAAAGGATCTTGAATCTAGAAGAGGAAGTTGGCCATCTTGGCAAGGAAAAAACAAGATTTGAAAAACAAGCAACAGACAATAAACAGGAGCTTCGTGAAACCAGACAGCAATGCACAGCTCTGCGGGAGCAGCTTCAGGGTTTGCTGGCTGCCACAGCAGCAGCAGGGCAGGTGGATGATAAAGAAACTGAAGAGAAGCTGAAAGCTGCTGAGGAAGAGAAGCAGGCTTTAGTGGATGAACAAAACAAGATGAAAGAAGAGTTTGAGAAGTGGAAAGAGCAATATCGACAAGAACATGAAGGGGAGGAACCAACTGAAGATGACAGGAATGAGGAAGTCCAAGCCATGGTGGAGAAACTGAAGCAGGAGGAAGAGAAACTTAAAAAAGCTGAAAATGCAATTGCCATTATGACAATGCTTAAGGAAGGCACTGTTCCTGAAACTGTTTCCACTGCAGGTGTTGCTGATAGCGGTGGTAAGGTCGAAGAACTTGAAGACAGAATCAGCCAGCTCGAGGCAGCTAGAGATGAACTGGAAGTATCAGTTGAGAAGTTAACAAAAGAAAAAGAAGCTCTGGAAGAGAAGGCCTTTGAACATGAAGAAAAAAACAAGGAGCTGACAGAGAAGAATGGAGAACTAGAAGAGAAGGTTAAAGATCTGGAGAAGGAGGTTGAGGAGCTGAGAAATGAACTGGATGACATTGGAGATGGGGTTCCTGTGGTATCTTCTTCTTTTTCTAGTGATGGACAAGATGTAGAGGGAATGTCTAGCAAGCTTTCTGAATTAGAAGGAGAACTGGCAAAAGCAACTCGTGACTTGGAGCAAGAAAAAGCTACAACATTGGCTCAAATAGAGGAAATTGACGCACTCAAGAAGGAGCTTGGAAGTTTAAAAGAAGGGTCTTCTGGTGAAGTGGAGGAATTAAGAGCACAGCTGGCTTCCACAAAGGAAATTTTAGAAGCTGACATAAAAGGAAAAGAACAAGCTCTTGCAGATGCAAAGAAAAGAATTGAAGAACTAGAGAAGAAGCTCTTAGAAAATGTGCCCATTGACACGGCCAAAGAAATTGGCGCTTATCAGGAGAAAATGGCTGTTCTTGAAAAGGACAAAGAAAAAGCTGTGAAGGAAAGTGTGACTCTCAAGGCATCAGTGACAACTCTAACAGCTAAAGTGGAAACATTGAACAAGAATATTGCACAACAGAAAGAGACAGAGAAAGAGTTACAGGATGCAAACAAAAAGATACGAGCTGACAGGGTAAAAGAACTGAAGGATGCTAAAGACCAGGCTGAAGCAAAATCCAAGAAACAAATAGAGGAAAATAACAAGAAAATACAAGCTCTTCAGAAGAGGATTAAAGAACTTGAAGCAAGTGGAATAAAACCTCAGGATTCAAAGACTGATACTGGTTTAGGTGCAAAAAGAAAGGACTCAAGAACAGCAGCTGACTTAGAAAAAGCAAACAAAGAAAAAGAGAAACTTCAGGCACAAGTTGAAGCATTGAAGAAGGCAGCACATGAGGATCACAGTAAAATCAAACAGCTAGAAAAAGATGTTAAAGAAGCTCAGTCAAAGGCCAAACCAGCTGGTCCATCAGCTGAAGAGAGAGCTGCTGCCAAGAAACAGGACAAACAACTTAAAGACTTGCAGAAAAACCTGGACATGGAGAAAAGAAAGTTTGAGAAAGTGAAAGAAACTCTCACTAAAACTGAAGAAGAGTTGAAAGATCTCAAAAAGGAACATGATGCTCTGATTGCAGACAGCAGAAAAGACAAGGATACTCTCTCTAAATTGGAAGTTGCTGCACAGGAAGGCCTTGCCGCTCAAGAGAAGGTGGATGATCTGACCAATGAAGTGAAGGCTCTTAGAGAAGAGAACAAAAGTCTTTCAGATAACTACAACAGTGAAAGAATTTTACGTAAGAAGTATTACAACATGATAGAAGATATGAAAGGCAAGATCAGAGTGTACTGCAGAGCCAGGCCTCTAAGTGGATCAGAGAAAGGAAGGGGAAATTATTCAGTGATCAAGTCTCCAGATGAGTACACTGTTGTGGTGGAAACACCTCGTGGTCCAAAGGACTTTCAGTATGATCAAGTGTTCACACCTGATCATGGACAGGAGAAAGTGTTCGAGGACACTAATAATCTTATCCAATCGGCTGTGGACGGGTACAATGTGTGTATCTTTGCCTATGGGCAGACAGGCTCTGGCAAAACATATCCTTTTAACTGGAAGTTGAACCAGTGA

Transcript

evm.model.contig_22668.2

ATGATGGCAACACGAAATCCGAAGGTCTCCCCTAAACGAAAGCCTTCGAAGCCGCAAGCAAGGGCCTCCACGTTATCCAAGGAACAAGGCACTTTAAAGCCTATTTTTTCACTTGGATGTACTTCACTGTTTTATCAAGTGTACTACAATACTGGAACAAAGTTTTCTTTAAACTTGTTAGCATGGACAGACACAGATGACACAGAGGGAACTAAAGAATCCGGAGAGTCTTCAGATCAAACCAAAGACACAGCAACTCCAGGAGAACTACAGAAAGGAAGCTTGATATCTGTCAGGGAAGCAGATGAAGCTAACAGAGGTGATGAGGCAGAGGATGAAATTAATCAGGCTGAAATGAATGGTGTTCATGAGGCGCCGCAGACAACTGACACagaggttcctcaaacaacagACACTGAAGGAGTTAATGGAACTGAGACAGATTCTCTTGGAAGCATGGAGAGTGGTGCAAGACGGAGAGTTAAAAGAAACACAGTTGTACCTACAGATGGTGAAGACAGTGGTCGGCAAACCCCTGATGTTGAATCTAGAAAAGATGCATGGAGTATTGCTGAAACTGATGCTGATGTTGAATCCAATGCTGCTTCAAGCCGACCAAGCTCAGCTCATAACAGGGTAAGACAGCGCCCTGCCACTGCAGTGGCAAGACAGCCAATCCCTGTTGCATCTGTAGAGAGGCCAATGACGGCACCAACCATTGATTACCATTCTTCATCAAGACTTCATGGGACAAGTGGAAGCTCACGACCTAAATCGACAGGTTCCCGCCCAAGATCAAGAGGTGAAGAAGGATTAAATCGTCCTGTGTCCTCAACTTCAGGAGCATTGGCAATAACTGATGGGGGAATTATGGCCTGGGAAGAACCATCACCAGATTCTAGTGAAGGGATAAGAGATAGAGAAAGCTCCTCTAGTCGAAGCAGTGATCTTTTGGCACCTCCTCAGTTACAAGGAGAACAGAATGCTTATATTCCTTACATTTATGCAAAAGATTGTATTCAGAGGGTAATGGATGAtatgaagaaaatgaaaagcagTCATGTGAAGGTTGTTGATCAGATTCAAGATCAATACAAATCACTGGAGGATGATATCCAGGCAAAATTCAACACTTTTGTTCTTAACTTGCGCAATGAATATTCCAACAAAGTCACCACGTTCCGACAAGTTATAACCATTCATCGTGAGGATTCATTCCGTACTAACACTTATTGGCAAGAAACAGTGAAGAGCCTCCAAAGCAAGAACCAGGTTCTGCTAAATGAAAAGAGACAACTTCTTATTAAAAACAGGGAAGAATTTACCAAGCTTGAACATGACAAGGTAACAGCTGTGAAAGATTTAACCAGGATGCTGGATGAACGACATGCTAAATACACCTTATTGTTGGCAGATTTTAAAGGTGAACAAGAAAAAGTGAGAGAACTTGAGGAAAAGTTGAAAGCTTTAGAAGAACAAGGTTTGAAACAACAGGAAGAGAACCAAACTTCCCATGAAGCTGAAATCCAAGCGTTAAAAGCAAAACATGAAGAGGAAGTCAATGAGTTAAAACAACAGTTAGAActtgttgaaaaagaaaagcaggaGAAAGATGAAGCACATCAGAAGGAGttaaaagaaagagaagaagaggaaacaaagaaaataaatgaGTTAACAGAGAAACACACAAATGAAGTAGAGACACTCAAGGCTGAAATTCAGAAACTTCAAGAAGAGATTGATGCTCTAAAGGCAAGTGGAGCAACAGTTGGGACAACTACTGTGATAACAACAACTGCAGTTACATCAGAAGTTGCTGAACCACAGACAACACTAATACCAAAAGAAGACAGACAAGAAGAGGTGAAAGAACAAGCAGAAGTAGTGGTTACAGAGCAAGCTGCTCCAGtagctgctactgctgctgctgctgctgccaCCACTACTGTTACAGTGTTAGACAATGCTGAAAAGGAGCAGCTTACCCAAGAGATTGCAAAACTTCAAGAAGAGATAGAAAAGAACAAAGCAGAAGCAGCCAAAACTAAAGAGGAActtgagaaagaaaaagaaaggatcTTGAATCTAGAAGAGGAAGTTGGCCATCTTGGCAAGGAAAAAACAAGATTTGAAAAACAAGCAACAGACAATAAACAGGAGCTTCGTGAAACCAGACAGCAATGCACAGCTCTGCGGGAGCAGCTTCAGGGTTTGCTGGCTGCCACAGCAGCAGCAGGGCAGGTGGAtgataaagaaactgaagaGAAGCTGAAAGCTGCTGAGGAAGAGAAGCAGGCTTTAGTGGATGAACAAAACAAGATGAAAGAAGAGTTTGAGAAGTGGAAAGAGCAATATCGACAAGAACATGAAGGGGAGGAAccaactgaagatgacagGAATGAGGAAGTCCAAGCCATGGTGGAGAAACTGAAGCAGGAGGAAGAGAAActtaaaaaagctgaaaatgcAATTGCCATTATGACAATGCTTAAGGAAGGCACTGTTCCTGAAACTGTTTCCACTGCAGGTGTTGCTGATAGCGGTGGTAAGGTCGAAGAACTTGAAGACAGAATCAGCCAGCTCGAGGCAGCTAGAGATGAACTGGAAGTATCAGTTGAGaagttaacaaaagaaaaagaagctcTGGAAGAGAAGGCCTTTGAacatgaagaaaaaaacaaggagCTGACAGAGAAGAATGGAGAACTAGAAGAGAAGGTTAAAGATCTGGAGAAGGAGGTTGAGGAGCTGAGAAATGAACTGGATGACATTGGAGATGGGGTTCCTGTGGtatcttcttctttttctagtGATGGACAAGATGTAGAGGGAATGTCTAGCAAGCTTTCTGAATTAGAAGGAGAACTGGCAAAAGCAACTCGTGACTTGGAGCAAGAAAAAGCTACAACATTGGCTCAAATAGAGGAAATTGACGCACTCAAGAAGGAGCTTGGAAGTTTAAAAGAAGGGTCTTCTGGTGAAGTGGAGGAATTAAGAGCACAGCTGGCTTCCACAAAGGAAATTTTAGAAGCTGACATAAAAGGAAAAGAACAAGCTCTTGCAGATGCAAAGAAAAGAATTGAAGAACTAGAGAAGAAGCTCTTAGAAAATGTGCCCATTGACACGGCCAAAGAAATTGGCGCTTATCAGGAGAAAATGGCTGTTcttgaaaaggacaaagaaAAAGCTGTGAAGGAAAGTGTGACTCTCAAGGCATCAGTGACAACTCTAACAGCTAAAGTGGAAACATTGAACAAGAATATTGCACAACAGAAAGAGACAGAGAAAGAGTTACAGGATGCAAACAAAAAGATACGAGCTGACAGGGTAAAAGAACTGAAGGATGCTAAAGACCAGGCTGAAGCAAAATCCAAGAAACAAATAGAggaaaataacaagaaaatacAAGCTCTTCAGAAGAGGATTAAAGAACTTGAAGCAAGTGGAATAAAACCTCAGGATTCAAAGACTGATACTGGTTTAGGTGCAAAAAGAAAGGACTCAAGAACAGCAGCTGACTTagaaaaagcaaacaaagaaaaagagaaacttCAGGCACAAGTTGAAGCATTGAAGAAGGCAGCACATGAGGATCACAGTAAAATCAAACAGCTAGAAAAAGATGTTAAAGAAGCTCAGTCAAAGGCCAAACCAGCTGGTCCATCAGCTGAAGAGAGAGCTGCTGCCAAGAAACAGGACAAACAACTTAAAGACTTGCAGAAAAACCTGGACATGGAGAAAAGAAAGTTTGAGAAAGTGAAAGAAACTCTCACTAAAACTGAAGAAGAGTTGAAAGATCTCAAAAAgGAACATGATGCTCTGATTGCAGACAGCAGAAAAGACAAGGATACTCTCTCTAAATTGGAAGTTGCTGCACAGGAAGGCCTTGCCGCTCAAGAGAAGGTGGATGATCTGACCAATGAAGTGAAGGCTCTTAGAGAAGAGAACAAAAGTCTTTCAGATAACTACAACAGTGAAAGAATTTTACGTAAGAAGTATTACAACATGATAGAAGATATGAAAGGCAAGATCAGAGTGTACTGCAGAGCCAGGCCTCTAAGTGGATCAGAGAAAGGAAGGGGAAATTATTCAGTGATCAAGTCTCCAGATGAGTACACTGTTGTGGTGGAAACACCTCGTGGTCCAAAGGACTTTCAGTATGATCAAGTGTTCACACCTGATCATGGACAGGAGAAAGTGTTCGAGGACACTAATAATCTTATCCAATCGGCTGTGGACGGGTACAATGTGTGTATCTTTGCCTATGGGCAGACAGGCTCTGGCAAAACATATCCTTTTAACTGGAAGTTGAACCAGTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16796 all species →	Microtub_bd	Microtubule binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR027640 all species →	Family	Kinesin-like protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031852 all species →	Domain	Spindle pole body-associated protein Vik1/Cik1, microtubule binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47972 all species →	KINESIN-LIKE PROTEIN KLP-3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23704	MIA3, TANGO1; transport and golgi organization protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.