Detailed information of evm.model.contig_23665.3 in Platygyra sinensis

Genomic Location: contig_23665:20432...38390
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06424
all species →		PRP1_NPRP1 splicing factor, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045075
all species →		FamilyPre-mRNA-splicing factor Syf1-likeInterproscan
IPR010491
all species →		DomainPRP1 splicing factor, N-terminalInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR003107
all species →		RepeatHAT (Half-A-TPR) repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11246
all species →		PRE-MRNA SPLICING FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000244
all species →		Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_23665.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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