Gene detail

Detailed information of evm.model.contig_23978.12 in Platygyra sinensis

Genomic Location: contig_23978:48616...58250
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006760 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03332 all species →	PMM	Eukaryotic phosphomannomutase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR005002 all species →	Family	Phosphomannomutase	Interproscan
IPR006379 all species →	Family	HAD-superfamily hydrolase, subfamily IIB	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR043169 all species →	Homologous_superfamily	Phosphomannomutase, cap domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10466 all species →	PHOSPHOMANNOMUTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004615 all species →	Molecular Function	phosphomannomutase activity	Interproscan
GO:0009298 all species →	Biological Process	GDP-mannose biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006013 all species →	Biological Process	mannose metabolic process	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17497	PMM; phosphomannomutase	EC:5.4.2.8	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.