Gene detail

Detailed information of evm.model.contig_24770.6 in Platygyra sinensis

Genomic Location: contig_24770:48757...57287
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_24770.6

ATGACATATGCTGTGAATCGAAAACTGTTGACATGGATCCAGTTGCGTGATGGAACCAAACTGGCGGCCAAACTGTGGATACCAGAATTGGTTGATACTGACAAGTCTGCAGATGATGAAAAATATCCTGCTATACTAGAATTTTTGCCATATCGTCGTATCGACTGGACAGCTCAAAGGGATGAGAAGACCCACCCATATTTTTGCTCTCATGGCTATGTTTGTGTGCGGGTAGACATGCGTGGATCTGGGGACTCAGAGGGATTTTGCTATGACGAATATGAAAAACAAGAGCAGGATGACTGTTGCGATGTCATCAAATGGATTTCCCAGCAAAAGTGGTGCACTGGAAATGTTGGTATGTATGGGAAAAGCTGGGGAGGATTCAATGGCCTTCAGGTTGCTGCTAGACAACCCTCCGCATTGAAGACTATCATATCCACCTATTCCACTGATGACCGGTATGCTGATGACATACATTACCGTGGTGGCTGTGTTCTTGCCAGGGAAATGCTATCATGGGCTCACATCATGCTCCTTTGGAATGCACGCCCTCCACATCCAGAGAGCTTAGGAACAAGATGGAAAGAAGTGTGGCTAGAGCGCTTAAACAAATCAAGTGAACCATGGGTACACAAATGGTTGTCACATCAAACACGTGATCCCTACTGGCAACATGGTTCCATCTGTGAAGATTACACCTCCATCAGGTGTCCAGTGTTCCTGATTGGTGGATTTTCTGATCTGTATACTGACCCAGTGTTTCGTATGGTAGAACATCTCAAGTGCCCTGTCCGTGCGTTGGTTGGGCCATGGTCCCATGCATGGCCTGCTGACTCTTCACCAGGGCCTCGGATAGACCACCTAAAAGAGTGCGTGAGGTGGTGGGACTGTCATTTGAAGGGCCTGGCTACTGGTGTCATGGATGAGCCTGTGATGAGGCTGTACCTGAGGGATGGCATTTCAAATGCGCACAAGGAAGATATCTGGCCAGGAAGATGGATAGCAGAGGACCGCTGGCCCTCAGACAATGTTCAATGTCAGGAATTTATTTTACAAAATGACAGAGGCTTGGTACTAGCATCAGAGAATGAATCCATTGACAATCAGCCAATAGAATCCAAGGTGTCAGTGAGGTCCTCGTTCCTCAGTGGTTCATGGGGCGGTCTTCCATTGGTGTTCAGTCTTGAGGAGCTGCCTGTGGAGCAGAGATTAGAGGACGCCTTGGCGGAGTGCTGGGAGACAGCAACTCTTAAAGAGCCTGTTGCAGTTTTGGGATTTGCCGAGGTTCGTCTACAGCTGAGCTGTGACAGGCCCTGTGCTCAGGTAGCCGCTAGACTGTGTGACATATTTCCAAACGGGGAGTCTTCTCTCATAACACGAGGCGTTCTAAACCTGACTCATGTACGTGGTCACTCACCAAAAGATATCCAACCGCTGAAGCCTGATGAAACCTTTCAAGCGCAGGTTAAATTTGATTCTACTGCCTATACTGTAGCCGCTGGTCATAAAATTCGTCTGGCGCTCTCCTCAGTTCACTGGCCCTATCTCTGGCCATCTCCACACGCATCATGCCTCTCCATACACACCGGAAGTAAGAGTAAGCTACTACTTCCGGTACGAGCATCGAATGACGACGAAGTAAGTGGAGGGGATGCACAGTTGAAAGAATTTGAGTCACCTGAATATAAACACGCAAGTTTACCTGTTGAAATCCGGAGAAATCCCGAGAAGAAAAGGAATCTAGAGATTGCTCAGCTGTCGGACGAATACAATTTGACTGTTACCTTGGACGCTGGATGTGTTGTTTTGAAAGACACAAACACCGTTTATGACGAAACAAACGTAGAAACCTTCACAATCAAAGAAGGCGAGCCAAACACAGCTAAGGTCACCATACAGGGCCAGGTTGTACTGAAGAAAGATGAAGAAACTGCTGACAAAGAGGATTCTGGTCTCAACCGGTGGGATACTAGAGTCCAGGCTCTCAGCGAGATGTGGTCTGATGAGCAGTTTTTCTACCTGAAAAGTCAATTAACGGCGTGGCACAATAATGAAGCGTGTTTTGATAAGACATGGACAAAGAAAATTGAACGGTTTTTTGTTTGA

Transcript

evm.model.contig_24770.6

ATGACATATGCTGTGAATCGAAAACTGTTGACATGGATCCAGTTGCGTGATGGAACCAAACTGGCGGCCAAACTGTGGATACCAGAATTGGTTGATACTGACAAGTCTGCAGATGATGAAAAATATCCTGCTATACTAGAATTTTTGCCATATCGTCGTATCGACTGGACAGCTCAAAGGGATGAGAAGACCCACCCATATTTTTGCTCTCATGGCTATGTTTGTGTGCGGGTAGACATGCGTGGATCTGGGGACTCAGAGGGATTTTGCTATGACGAATATGAAAAACAAGAGCAGGATGACTGTTGCGATGTCATCAAATGGATTTCCCAGCAAAAGTGGTGCACTGGAAATGTTGGTATGTATGGGAAAAGCTGGGGAGGATTCAATGGCCTTCAGGTTGCTGCTAGACAACCCTCCGCATTGAAGACTATCATATCCACCTATTCCACTGATGACCGGTATGCTGATGACATACATTACCGTGGTGGCTGTGTTCTTGCCAGGGAAATGCTATCATGGGCTCACATCATGCTCCTTTGGAATGCACGCCCTCCACATCCAGAGAGCTTAGGAACAAGATGGAAAGAAGTGTGGCTAGAGCGCTTAAACAAATCAAGTGAACCATGGGTACACAAATGGTTGTCACATCAAACACGTGATCCCTACTGGCAACATGGTTCCATCTGTGAAGATTACACCTCCATCAGGTGTCCAGTGTTCCTGATTGGTGGATTTTCTGATCTGTATACTGACCCAGTGTTTCGTATGGTAGAACATCTCAAGTGCCCTGTCCGTGCGTTGGTTGGGCCATGGTCCCATGCATGGCCTGCTGACTCTTCACCAGGGCCTCGGATAGACCACCTAAAAGAGTGCGTGAGGTGGTGGGACTGTCATTTGAAGGGCCTGGCTACTGGTGTCATGGATGAGCCTGTGATGAGGCTGTACCTGAGGGATGGCATTTCAAATGCGCACAAGGAAGATATCTGGCCAGGAAGATGGATAGCAGAGGACCGCTGGCCCTCAGACAATGTTCAATGTCaggaatttattttacaaaatgaCAGAGGCTTGGTACTAGCATCAGAGAATGAATCCATTGACAATCAGCCAATAGAATCCAAGGTGTCAGTGAGGTCCTCGTTCCTCAGTGGTTCATGGGGCGGTCTTCCATTGGTGTTCAGTCTTGAGGAGCTGCCTGTGGAGCAGAGATTAGAGGACGCCTTGGCGGAGTGCTGGGAGACAGCAACTCTTAAAGAGCCTGTTGCAGTTTTGGGATTTGCCGAGGTTCGTCTACAGCTGAGCTGTGACAGGCCCTGTGCTCAGGTAGCCGCTAGACTGTGTGACATATTTCCAAACGGGGAGTCTTCTCTCATAACACGAGGCGTTCTAAACCTGACTCATGTACGTGGTCACTCACCAAAAGATATCCAACCGCTGAAGCCTGATGAAACCTTTCAAGCGCAGGTTAAATTTGATTCTACTGCCTATACTGTAGCCGCTGGTCATAAAATTCGTCTGGCGCTCTCCTCAGTTCACTGGCCCTATCTCTGGCCATCTCCACACGCATCATGCCTCTCCATACACACCGGAAGTAAGAGTAAGCTACTACTTCCGGTACGAGCATCGAATGACGACGAAGTAAGTGGAGGGGATGCACAGTTGAAAGAATTTGAGTCACCTGAATATAAACACGCAAGTTTACCTGTTGAAATCCGGAGAAATCCCGAGAAGAAAAGGAATCTAGAGATTGCTCAGCTGTCGGACGAATACAATTTGACTGTTACCTTGGACGCTGgatgtgttgttttgaaagacACAAACACCGTTTATGACGAAACAAACGTAGAAACCTTCACAATCAAAGAAGGCGAGCCAAACACAGCTAAGGTCACCATACAGGGCCAGGTTGTACTGAAGAAAGATGAAGAAACTGCTGACAAAGAGGATTCTGGTCTCAACCGGTGGGATACTAGAGTCCAGGCTCTCAGCGAGATGTGGTCTGATGAGCAGTTTTTCTACCTGAAAAGTCAATTAACGGCGTGGCACAATAATGAAGCGTGTTTTGATAAGACATGGACAAAGAAAATTGAACGGTTTTTTGtttga

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02129 all species →	Peptidase_S15	X-Pro dipeptidyl-peptidase (S15 family)	Family	Interproscan
PF08530 all species →	PepX_C	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR005674 all species →	Family	CocE/Serine esterase	Interproscan
IPR050585 all species →	Family	Xaa-Pro dipeptidyl-peptidase/Cocaine esterase	Interproscan
IPR013736 all species →	Domain	Xaa-Pro dipeptidyl-peptidase, C-terminal	Interproscan
IPR000383 all species →	Domain	Xaa-Pro dipeptidyl-peptidase-like domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43056 all species →	PEPTIDASE S9 PROLYL OLIGOPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0008239 all species →	Molecular Function	dipeptidyl-peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_24770.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.