Gene detail

Detailed information of evm.model.contig_25002.1 in Platygyra sinensis

Genomic Location: contig_25002:3257...7815
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_25002.1

ATGTGGCTGATCTGCAAGGACAACTGGCAGCAAGTAAAGAACAAGTTGCCGATCTGCAAGGAACTCTGGCAGCGATCAAACAACACGTTTATTGATCTACAAGGACAACTGGCAGCGACAAACAAACAAGTTATTGATCTGAAAGGACAACTGGTAGCGAGCAACAAAAAGGTTCTTGATCAGCAAGGACAACTGGCAAAGAGCAACAATAAGGTTATTCATCAACAAGTACAACTGGAAACAATAAACAAACAACTTACTGATTTGCAAAGACAACTGGTAGCGAGAAGCAAACAAGTTACGGATGTGCAAGAACAAATGGCTACAAGCAAAAAACAAGTTACTGATCTGCAAGGACAGCTGGCAGCGGGCAACAAAAAAGTTACTGATCTTGAAGAACAACTTGCAACGACCAACGAACAACTTACCGATATGCAAGGACAATTTACAGCGAGGAACGAACAAGTTGCTCATCTACAGGAACAGTTAGCAACGAGCAACGAACAAGTTACTGATATGCAAGGACAACTAACAGAAATAAACGACCAAGTCATTGATCTGCGCGGACCACTGGCAGCGAGCAACGCACAAGTTACTGAACTAGATGGACAACTCGCAACGAGCAAAGCGCGAGCTACTGATCTGCAAGGTCAACTCACAGCGAGTGAGCAACAGTTGTCTGATTTTCAGCCTCAGCAGACAAGACGAGACCAACAAATTAAAGATCTGCAAGGACAACTGGAAAAAGGCAAACAACAAGTAACCGATATGGGAAGGCAACTGAAAGCAAGCAACAAACAAGCTACTGATCTGCAAGAACAACTGGTCAAGAGCAACGAACACGTTACTGATCTGCAAGGACAACTGGAAACGAATAAAGAACAAGTGACTGTTCTGCAAGGAGAAATCACAGCGATAGACAAACACGTAACTGATCTCCAAGGGCAACTGGCAACAAACGAACAAGTTGTGGGTATACGAAGACAACTGGCAACGAGCAACGAACAAGTTATTGATCTGCAAGGACATCTGGGAAAAGGCAACGAACAAGCTACGGACCTGCAAGAACAACTGGAAAAGAGAAACGAACAAGTAACTGATCTGCGAGAACAGTTGACATCTAGCAAGGGACAAGTCACTGATTTGCAAGAAGTACTGGCTGCGAGTAACGATCAAGCTACTGATCTGCAAGGACATCTAAGAGCGAGAGACCAGCAAGTTGCTGGTCTGCAAGGACAACTGGAAGCGCGCAACGAACAAGTCACTGATCTGCAAGGACCTCTAAGAGCTAGAGACCAGCAAGTTACTGATCTGCAAGGACATCTGGGAGCGAGAGTCCAACAAGTTTCTGATATCCAGGAACAACTGGCAACAAGTAACCAACAGGTTACTGATCTGCAAGAACAGTTGGCAAAGAGAAACCAACAAGTTACTGATCTGCAAGTTCAACTGACCGCGAGCAAAGAACAGGTTACTGATCTGCAAGGACAGCTGACATTGAAAGACCAACAACTTAGCAATCTGGAAGAAGAGTTAGATGAAGTAGACCAAGAAGTTACCGACCTGCACCAACGATTAAAACTGAAACACCAACAAGTTACTAGTCTGCAAGAAGAGATGACCGCGAGAGACCAGTGCGTGACTGATCTGCAAGGACAATGGAGAGCGAGCAGCGAGCAAGTTACTGATCTGGAAGGTCAACTCGCAGCGAGAGACCAACAAGTTAGTGATCTGCAAAGACAAATGGCTGATTTGAGAGCGCAAGTTATAGCGAAAGACCGAAAGGTTTGCGTTCTAGAAGGGGACTTAGATGACGTAGACCAAGAGGTTATCGATCTGCAAAAACAAATGGCAGCAAAAGATCAGCAAGTTAGTGATCTGGAAAAGCGATTAAAAGTAAAAAATCAACAGATCACTGATCTGCAAGGGCTGCAATTAACTGATCTGCAAGGACAACTGGCAGCAAGCACCAAAGAAGTTACCGATCTGCGAGGACAACTGGCAGTGAGCAACAAACAAGTTACTGATCTGCGAGAACAACTGGCAGCGAGCATTGAACAGGTTGCTGAACTACAGGGACAACTCGCAACGATCAGCACGCGAGCTACTGATCTGCAATGTCAACTGACAGCAAGTGAGCAACAGTTGTCCGATTTTCAACAACAAAGAGACCAACAAGTTAGTGTTCTCCAAAGAGCAAGGACAACGATAGACCGACAGTTTACTGATCTGCAAGAACAGTTGAGAACGAGAGACCAACACGTTATGGATCTGGAAGAACAGGGAAGAAATAGAGACCAGAAAGTTACTGCTCTGCAAAGACAAGTGGCAGCGTACAAGAAACAGGTTACTGATCTGCGAGGACAGGTGACAGCGAGAGACCAGGGAGTAACTGTTCTGCAAGGACAACTGTCAGCAAACAACGAACAAGTTATTGATCTGCAAAGACAACTGAGATCGAGCAATGAACAAGTCACTGATCTGCTGGGACAACTGGAAGAGAGCAACGAACAAGTTGCTGATCTGCAAAGACAACTGACAGCGAGCAACGCACAAGTGGGCCGGCTGAGGCAGCCTGTTACTACATTACATGAAACTAATTCCAGTGAAAATACACCTGAAATGCAACGAGACTGGGAAATAAATAGGAATGAAATAATGCTGATATCAGACGAGCTGCTTGGGCAAGGTGCATGGGGGAGAGTTCTTCGAGGGAAATTCCGTCGTTGCGATGTGGCTGTAAAAGAAATCTATCAGGCCATTTTGTCCCCTCACAACAGGACGGCTTTTGAGCGAGAAGTGGGTATTGCCTCAAGATGCCGCCATCCCTGCCTGCTGCAGTTTATTGGAGCAACAAACGATGAGGAAGGGCTATTACTAGTAACAGAGCTCATGAACCGTAGTTTGCGATCTTTATATCATGAGAGACCACTCACTGAGAGAGAAGTTTCTGTGATCTCACTGGATGTAGCTCAAGCACTAAACTACCTCCACCAGACCAAACCTGATCCTATTATCCACCGTGATATCAGTAGTGCCAATGTGTTGCTTTGGCGACAAGGTGACAGCTGGAGAGGCAAAGTGTCGGATTATGGTACTGCTAATTTCGTCCGTCAGTGCAGGATAGAAGAACCTGGAGCTGTGATTTACTGCGCACCTGAGGCCCTCAGTGGAGCACAGGATCAAATCATCAGTTGTAAGGAAGATTTCGTCGGCAGCATCGGTATTACGTTTTTGCCTCAAGTTATAGGCCTTTCATCGGTCTCTATGCCTGGTGACAGCCCAAAAACAGGAAATCTTGAGGCCCTACTGATCTACATCACAAGTGCGCTTGACGCTCTTTTTGTTTTGAAGTTCGGAAAATCTCTCCGGTTCTCCAGGTCAATTTCGTGGCGAATAGCACAACCTGTAGTTGGTTCCCTGCAGACTTACTGGCGGGAAATATGGTGTCCTCGAGCTAGTTGTTCCGTCGCAAGTATTTCCACTTCTGGTAAACAGTGCAAGCTAACGATCGTTATCGATGCTGGACGAAGATTGCGTTCCACCAGAACATTTTCTTGCCCATCTTCCGGCTGCGATGACGCCGAAGACGGTAGAAATTCTGGTGCAAGAACCCAATCGTTCCTGCGTCGATTACGATCGTTCGCTTGCACTGTTTACCAGCAAGCGGAAATACTTGCGACGGAACAACTAGCTCGAGGACACCATATTTCCCGCCAGTAA

Transcript

evm.model.contig_25002.1

ATGTGGCTGATCTGCAAGGACAACTGGCAGCAAGTAAAGAACAAGTTGCCGATCTGCAAGGAACTCTGGCAGCGATCAAACAACACGTTTATTGATCTACAAGGACAACTGGCAGCGACAAACAAACAAGTTATTGATCTGAAAGGACAACTGGTAGCGAGCAACAAAAAGGTTCTTGATCAGCAAGGACAACTGGCAAAGAGCAACAATAAGGTTATTCATCAACAAGTACAACTGgaaacaataaacaaacaacTTACTGATTTGCAAAGACAACTGGTAGCGAGAAGCAAACAAGTTACGGATGTGCAAGAACAAATGGCTACAAGCAAAAAACAAGTTACTGATCTGCAAGGACAGCTGGCAGCGGGCAACAAAAAAGTTACTGATCTTGAAGAACAACTTGCAACGACCAACGAACAACTTACCGATATGCAAGGACAATTTACAGCGAGGAACGAACAAGTTGCTCATCTACAGGAACAGTTAGCAACGAGCAACGAACAAGTTACTGATATGCAAGGACAACTAACAGAAATAAACGACCAAGTCATTGATCTGCGCGGACCACTGGCAGCGAGCAACGCACAAGTTACTGAACTAGATGGACAACTCGCAACGAGCAAAGCGCGAGCTACTGATCTGCAAGGTCAACTCACAGCGAGTGAGCAACAGTTGTCTGATTTTCAGCCTCAGCAGACAAGACGAGACCAACAAATTAAAGATCTGCAAGGACAACTGGAAAAAGGCAAACAACAAGTAACCGATATGGGAAGGCAACTGAAAGCAAGCAACAAACAAGCTACTGATCTGCAAGAACAACTGGTCAAGAGCAACGAACACGTTACTGATCTGCAAGGACAACTGGAAACGAATAAAGAACAAGTGACTGTTCTGCAAGGAGAAATCACAGCGATAGACAAACACGTAACTGATCTCCAAGGGCAACTGGCAACAAACGAACAAGTTGTGGGTATACGAAGACAACTGGCAACGAGCAACGAACAAGTTATTGATCTGCAAGGACATCTGGGAAAAGGCAACGAACAAGCTACGGACCTGCAAGAACAACTGGAAAAGAGAAACGAACAAGTAACTGATCTGCGAGAACAGTTGACATCTAGCAAGGGACAAGTCACTGATTTGCAAGAAGTACTGGCTGCGAGTAACGATCAAGCTACTGATCTGCAAGGACATCTAAGAGCGAGAGACCAGCAAGTTGCTGGTCTGCAAGGACAACTGGAAGCGCGCAACGAACAAGTCACTGATCTGCAAGGACCTCTAAGAGCTAGAGACCAGCAAGTTACTGATCTGCAAGGACATCTGGGAGCGAGAGTCCAACAAGTTTCTGATATCCAGGAACAACTGGCAACAAGTAACCAACAGGTTACTGATCTGCAAGAACAGTTGGCAAAGAGAAACCAACAAGTTACTGATCTGCAAGTTCAACTGACCGCGAGCAAAGAACAGGTTACTGATCTGCAAGGACAGCTGACATTGAAAGACCAACAACTTAGCAATCTGGAAGAAGAGTTAGATGAAGTAGACCAAGAAGTTACCGACCTGCACCAACGATTAAAACTGAAACACCAACAAGTTACTAGTCTGCAAGAAGAGATGACCGCGAGAGACCAGTGCGTGACTGATCTGCAAGGACAATGGAGAGCGAGCAGCGAGCAAGTTACTGATCTGGAAGGTCAACTCGCAGCGAGAGACCAACAAGTTAGTGATCTGCAAAGACAAATGGCTGATTTGAGAGCGCAAGTTATAGCGAAAGACCGAAAGGTTTGCGTTCTAGAAGGGGACTTAGATGACGTAGACCAAGAGGTTATCGATCTGCAAAAACAaatggcagcaaaagatcaGCAAGTTAGTGATCTGGAAAAGCgattaaaagtaaaaaatcaACAGATCACTGATCTGCAAGGGCTGCAATTAACTGATCTGCAAGGACAACTGGCAGCAAGCACCAAAGAAGTTACCGATCTGCGAGGACAACTGGCAGTGAGCAACAAACAAGTTACTGATCTGCGAGAACAACTGGCAGCGAGCATTGAACAGGTTGCTGAACTACAGGGACAACTCGCAACGATCAGCACGCGAGCTACTGATCTGCAATGTCAACTGACAGCAAGTGAGCAACAGTTGTCCGATTTTCAACAACAAAGAGACCAACAAGTTAGTGTTCTCCAAAGAGCAAGGACAACGATAGACCGACAGTTTACTGATCTGCAAGAACAGTTGAGAACGAGAGACCAACACGTTATGGATCTGGAAGAACAGGGAAGAAATAGAGACCAGAAAGTTACTGCTCTGCAAAGACAAGTGGCAGCGTACAAGAAACAGGTTACTGATCTGCGAGGACAGGTGACAGCGAGAGACCAGGGAGTAACTGTTCTGCAAGGACAACTGTCAGCAAACAACGAACAAGTTATTGATCTGCAAAGACAACTGAGATCGAGCAATGAACAAGTCACTGATCTGCTGGGACAACTGGAAGAGAGCAACGAACAAGTTGCTGATCTGCAAAGACAACTGACAGCGAGCAACGCACAAGTGGGCCGGCTGAGGCAGCCTGTTACTACATTACATGAAACTAATTCCAGTGAAAATACACCTGAAATGCAACGAGACTGGGAAATAAATAGGAATGAAATAATGCTGATATCAGACGAGCTGCTTGGGCAAGGTGCATGGGGGAGAGTTCTTCGAGGGAAATTCCGTCGTTGCGATGTGGCTGTAAAAGAAATCTATCAGGCCATTTTGTCCCCTCACAACAGGACGGCTTTTGAGCGAGAAGTGGGTATTGCCTCAAGATGCCGCCATCCCTGCCTGCTGCAGTTTATTGGAGCAACAAACGATGAGGAAGGGCTATTACTAGTAACAGAGCTCATGAACCGTAGTTTGCGATCTTTATATCATGAGAGACCACTCACTGAGAGAGAAGTTTCTGTGATCTCACTGGATGTAGCTCAAGCACTAAACTACCTCCACCAGACCAAACCTGATCCTATTATCCACCGTGATATCAGTAGTGCCAATGTGTTGCTTTGGCGACAAGGTGACAGCTGGAGAGGCAAAGTGTCGGATTATGGTACTGCTAATTTCGTCCGTCAGTGCAGGATAGAAGAACCTGGAGCTGTGATTTACTGCGCACCTGAGGCCCTCAGTGGAGCACAGGATCAAATCATCAGTTGTAAGGAAGATTTCGTCGGCAGCATCGGTATTACGTTTTTGCCTCAAGTTATAGGCCTTTCATCGGTCTCTATGCCTGGTGACAGCCCAAAAACAGGAAATCTTGAGGCCCTACTGATCTACATCACAAGTGCGCTTGACgctctttttgttttgaagttCGGAAAATCTCTCCGGTTCTCCAGGTCAATTTCGTGGCGAATAGCACAACCTGTAGTTGGTTCCCTGCAGACTTACTGGCGGGAAATATGGTGTCCTCGAGCTAGTTGTTCCGTCGCAAGTATTTCCACTTCTGGTAAACAGTGCAAGCTAACGATCGTTATCGATGCTGGACGAAGATTGCGTTCCACCAGAACATTTTCTTGCCCATCTTCCGGCTGCGATGACGCCGAAGACGGTAGAAATTCTGGTGCAAGAACCCAATCGTTCCTGCGTCGATTACGATCGTTCGCTTGCACTGTTTACCAGCAAGCGGAAATACTTGCGACGGAACAACTAGCTCGAGGACACCATATTTCCCGCCAGTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10174 all species →	Cast	RIM-binding protein of the cytomatrix active zone	Coiled-coil	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR019323 all species →	Family	Active zone protein ELKS	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18937 all species →	STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_25002.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.