Detailed information of evm.model.contig_25294.1 in Platygyra sinensis

Genomic Location: contig_25294:1551...23143
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11547
all species →		E3_UbLigase_EDDE3 ubiquitin ligase EDDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024725
all species →		DomainE3 ubiquitin-protein ligase UBR5, ubiquitin-associated domainInterproscan
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46276
all species →		E3 UBIQUITIN-PROTEIN LIGASE UBR5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043130
all species →		Molecular Functionubiquitin bindingInterproscan
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0034450
all species →		Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0090263
all species →		Biological Processpositive regulation of canonical Wnt signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_25294.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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