Detailed information of evm.model.contig_26575.11 in Platygyra sinensis

Genomic Location: contig_26575:120068...132757
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632
all species →		HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00415
all species →		RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408
all species →		RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR000569
all species →		DomainHECT domainInterproscan
IPR042469
all species →		FamilyE3 ubiquitin-protein ligase HECTD3Interproscan
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR035983
all species →		Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46654
all species →		E3 UBIQUITIN-PROTEIN LIGASE HECTD3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_26575.11.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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