Gene detail

Detailed information of evm.model.contig_26759.1 in Platygyra sinensis

Genomic Location: contig_26759:1334...5431
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00487 all species →	FA_desaturase	Fatty acid desaturase	Domain	Interproscan
PF08557 all species →	Lipid_DES	Sphingolipid Delta4-desaturase (DES)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005804 all species →	Domain	Fatty acid desaturase domain	Interproscan
IPR011388 all species →	Family	Sphingolipid delta4-desaturase	Interproscan
IPR013866 all species →	Domain	Sphingolipid delta4-desaturase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12879 all species →	SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0030148 all species →	Biological Process	sphingolipid biosynthetic process	Interproscan
GO:0042284 all species →	Molecular Function	sphingolipid delta-4 desaturase activity	Interproscan
GO:0046513 all species →	Biological Process	ceramide biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04712	DEGS; sphingolipid 4-desaturase/C4-monooxygenase	EC:1.14.19.17 EC:1.14.18.5	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.