Detailed information of evm.model.contig_27160.1 in Platygyra sinensis

Genomic Location: contig_27160:4134...13280
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001008 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13240
all species →		zinc_ribbon_2zinc-ribbon domainDomainInterproscan
PF00632
all species →		HECTHECT-domain (ubiquitin-transferase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026870
all species →		DomainZinc-ribbon domainInterproscan
IPR000569
all species →		DomainHECT domainInterproscan
IPR035983
all species →		Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan

 PANTHER
No PANTHER signature was recorded for evm.model.contig_27160.1 in Platygyra sinensis.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_27160.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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