Detailed information of evm.model.contig_27508.6 in Platygyra sinensis

Genomic Location: contig_27508:39144...40450
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01142
all species →		TruDtRNA pseudouridine synthase D (TruD)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001656
all species →		FamilyPseudouridine synthase, TruDInterproscan
IPR020103
all species →		Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR042214
all species →		Homologous_superfamilyPseudouridine synthase, TruD, catalytic domainInterproscan
IPR011760
all species →		DomainPseudouridine synthase, TruD, insertion domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13326
all species →		TRNA PSEUDOURIDINE SYNTHASE DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001522
all species →		Biological Processpseudouridine synthesisInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0009451
all species →		Biological ProcessRNA modificationInterproscan
GO:0009982
all species →		Molecular Functionpseudouridine synthase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_27508.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP