Detailed information of evm.model.contig_28430.2 in Platygyra sinensis

Genomic Location: contig_28430:19679...39756
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17771
all species →		ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF01562
all species →		Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF13688
all species →		Reprolysin_5Metallo-peptidase family M12FamilyInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR041645
all species →		DomainADAMTS, cysteine-rich domain 2Interproscan
IPR006586
all species →		DomainADAM, cysteine-rich domainInterproscan
IPR050439
all species →		FamilyADAMTS and ADAMTS-likeInterproscan
IPR002870
all species →		DomainPeptidase M12B, propeptideInterproscan
IPR001590
all species →		DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR024079
all species →		Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →		ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0030198
all species →		Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_28430.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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