Detailed information of evm.model.contig_28924.1 in Platygyra sinensis

Genomic Location: contig_28924:301...6473
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10408
all species →		Ufd2P_coreUbiquitin elongating factor coreFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019474
all species →		DomainUbiquitin conjugation factor E4, coreInterproscan
IPR045132
all species →		FamilyUbiquitin conjugation factor E4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13931
all species →		UBIQUITINATION FACTOR E4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000151
all species →		Cellular Componentubiquitin ligase complexInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0034450
all species →		Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0030433
all species →		Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0036503
all species →		Biological ProcessERAD pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_28924.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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