Detailed information of evm.model.contig_28950.3 in Platygyra sinensis

Genomic Location: contig_28950:6408...8107
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13495
all species →		Phage_int_SAM_4Phage integrase, N-terminal SAM-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010998
all species →		Homologous_superfamilyIntegrase/recombinase, N-terminalInterproscan
IPR052925
all species →		FamilyPhage Integrase-like RecombinaseInterproscan
IPR004107
all species →		DomainIntegrase, SAM-like, N-terminalInterproscan
IPR013762
all species →		Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR011010
all species →		Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR002104
all species →		DomainIntegrase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34605
all species →		PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan
GO:0006310
all species →		Biological ProcessDNA recombinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_28950.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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