Gene detail

Detailed information of evm.model.contig_29037.5 in Platygyra sinensis

Genomic Location: contig_29037:47495...58760
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04969 all species →	CS	CS domain	Domain	Interproscan
PF04968 all species →	CHORD	CHORD	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007051 all species →	Domain	CHORD domain	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46983 all species →	CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

No Gene Ontology signature was detected for evm.model.contig_29037.5. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16729	CHORDC1, CHP1; cysteine and histidine-rich domain-containing protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.