Detailed information of evm.model.contig_29831.4 in Platygyra sinensis

Genomic Location: contig_29831:58476...64013
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
No Pfam domain signature was detected for evm.model.contig_29831.4. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013949
all species →		FamilyU3 small nucleolar RNA-associated protein 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23271
all species →		HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0030515
all species →		Molecular FunctionsnoRNA bindingInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan
GO:0034388
all species →		Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_29831.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP