Gene detail

Detailed information of evm.model.contig_31338.2 in Platygyra sinensis

Genomic Location: contig_31338:27651...48458
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_31338.2

ATGCCATGCGTAACCCCCAACCGTCCTCCCACAATAGCTTCCACTAGTGCAACAAGCACGAGCTTTGGAATCAGCACCTCAACATATCCTGAGTCTAGTAATGAGGCCACATCCTCCACTTACCCCTCCACGCCCCATCATGGGGACTCACAGCATGGGGGCCCTGCTCGAGGGGTCTCTGATGGATCTGAAACAAATGGGACCTTTGTTTTGGGACCTGGAGTTGAAAGTGATGAAAGAAAGTTCATTAGAAAAGTCGTTACTGCCGTGCAGAGGTACTTGTCATCACAGGCCTGGTCTGGTGGACCCTACCCAATAGCCATACCTCAGACCTTACGAGCAGCTCTCCAAGACACAAGTGATCCCCAGATGGGTGGTACAGGGGCTGCAAGGACATCTAACTGGGATAACAATTCCAAAAAAGAATTGAGATCCGTGTTTGATCTTGTCGGTCATCTGTGTGGTCGCTCAGTGCCAGGAATTCCACTAGCCTCCACTCTCCCAACATGTCCTGTTGACCGTGTGCGTCAGATCCACTGGATGTACTCCACACTGCTTACTTTCTTGAGAACGCAAGGTGCAATGATGTCTCATGTCAAACCAGAACACTTACTAGATTATACTGATTATCGCCGCTGGCAGAAAATCCATCGAAAACTCACAGGAACGAATGAAGAAGACTTTCTTAGTGATAGCAGCGCTAGCAAATTTGAGTTAGCTCAATTTGAAGCCATCTCAGCTCAGGCGTGGACTCACATCCTGTGTCAGCTTATCAAGGTCTTGATACTGAGCCGTATCACCCCACATCAGTTTAAAAAGCTTCAGTTTCCCAACAAGAGCGTTCATTTGCCAGACGTGAATCCCGATCCGCTGACCAGCAATGTTTATAGTGTGGGAGAGCGGATCTTGCTAGCATGGATCAATCATCACTATAACATTCAGAGGAACATCAACTGGCCTGCTGCTATTGGCGGTTCCAGCCCTCCATGTCGATGGATTGTGAACTTTGATGTTGATTTTATGGATGGACTGGTACTAGCTGCTCTTGTGAGCGCGCATGTTCCATTTGTTATTTCAACCCATCTGTACTCCATGTACACTCGTCCCAGTAAAGCCGAGCAGTGCCTTCATAATGTACTCAAAGTTGTTGAAGCTCTCAGACATATAGGCTTGGACTATGACATCCAGCCAACAGACCTGACGGAACCCAACCCAATCACAATTCTCCTGTTATGTATTCATCTGTATCAGCGGCTGCCTCACTACTTGCCACGCGCAACTGTTGCATTTGAAGGTCCGCTACACGACACGGTAACAAAACATGTTCGACTTCAGAATCCTAGTACCAAGCCACTAGTGTATCAGGTTCTTTTGGCGGGAAGAGATGCTGCCGACTTTCGACTTCCAATGGGAGACACAATACAGGTTCCGCCTAAAGGACACCTTCAGATGCCAGTAGAGTTCAAGAGCCGTTTTCTCAGACCGTGTAGTGGAACATTAGTTCTTGTTGGGAAACGAGAAGGAAGTCCATGTGGAAACACTCTTGTATTTTCCTTAGATACTTGCATCACCAACATTGTTCCTGTGGCAACAATTAAAAGCGAGTCAGCATGCTACGAACTTCAGAAGGTGAATTTTGACGTCACTAATCCATTCCCGCTGACTGGAGAGTTCCGTATCGTGTTGGTAGAAGCTCGGAATTCATTTCCCGGCTCCTCGCTGCCGAAACCAAAGCTCTCCAAATCCAACAAGAATTTAAAGAAAGTGGAGTCAAGAACAGATCACGGGCAAATTAACAAATCACCGAGAAGAGACTTTCCACCCAAAATTGAACAACAAAAGACTGAGTCAGTAACAGTTCCTCCAGGTCCTATGCTAAGCGCCTTCTGGTGTCCTTCCAGTACAATTCATCTTGAGGCCAACAGCTCAGGAGAAGTGGAAATCCAGTTTTTACCTTTTGATGTCGGTCATAGGCAGTGCTCGATTCTCTTTATAAACGATAAGATTGGCGAGTTTCTCTATTGCATTGAAGCAAACGCCACCCTCCCCCTCCCCTCCCCGATGCCCGTTGCCGAGTCCCCCCATAGCATACGGATTAGCAGTGCTGCAGCAGCCAGGAGCGGTAGGGGGGCGTTCGGCGGGAATGAGAGAGTGGTGTACTGGAAATGCGAACATAACGAGTCATTTACGGAAGATTTGTACATTCCGCTCGTGAATGAGGCAAGGGAGAATGCTTTAGCAATCGCCGCTCAACAGCGCATGTCAGAGAAGGAGCTACAACGCCGAAAGCTGACAGGTACGCTGGCCAGTTGTACCGTCACTGCAAGCGTGACAGCACTGGGTCTAGGAGGGGATAAATTCTTGCACCCTGGTGACACCAACACTAAGAGGGACTTTGAAAAAGCGATCACGGAGTTCCAAACAGAACTGAGCTCCAAGTTCTTTCGGGCTCCTTCTCAACTCATCATCCCAGCGAGTAACAGCGGAAAGAACGGTGAGTCGATCTCTGCCGCAGTCAAGTCCAGGCCACTACGTGATACAGTTCCATTACCAGTGCTATTCCAGCCCAAAGGACCTGGACACTACCCATGTCAAATTACTCTAAAATCTGCGTATGACATAAGAGTGTATCAGCTAGAATGTACTGTGTGTCCTGAGGGCTCAGTTCTAGAGCTGGATTTCATCACGCCAACACATCAGTCAGTAACGCAGGATATACCTGTGGTCAACCAAACTAATCAGGACTGGAATTTGACGGCAACTTTAGAGGGGGAGGGGTTCTATGGTCCACCTGTAATGGTTGCAAAATCTCACCTCACTTCCAACTACCCCCTGATGTTTAAACCTTGTTACGAGGGACCAGTGGAGGGTAAGCTAGTGCTGACAAACACTTTAGATGGCACAGAGCAGGTCTACAGGCTTCTAGGAACAGGACAAAAACCGCTTCCTCTAGATCACATCTTGATAGAGTGTCCTGCCAAACAAAGTGCCACTTACACTCTGAGAGTTCCGAATGTAACGAAAAGTAAACTCACCTTCCAGGTCAAGACCGACCTTGATATCTTGAGTGGTCCATCGTCGGTCACAGTCCTCCCCGGAAAGACAGCCGAGCACGTGATCACCATTTCACCCTGGAAACGAGGCACGTCCACTGGAATTATTTCATTCGAAACCTCCGCGGAGCCCTCAGGCAGTTCTGACGCGCCAAGAGTTGAAGGCTATGACGAAAATCTGAATAACAGAAAGTCCCCTACCAACGATACTCAAGCTCGTTTGTCCCAGGAGCTCACAGGTGATCTCAGACGCCAACCTTACCGTTTGTGGTACACGATAGAAGTTCAATCCTCAGCACCCAATCCTGAGCGGACCCTGGAGGTAACATGTGCAGCACATTCGGTAGTCGCAGTCGACATAGCAGTGACTAACCCTACCCGAGAGAGGATTGTCATGGACGTACTAATTGATGGCGTGGCCCTGTCTGGTGAGCCCGCAATCACTCTGCACCCTCGACAGCAAGTTATATATCAAGTCAGATTTGCCCCGACGGTGATCGGCGAATATACTGGCAGTGTGATTTTCCAGCATGAATCAGTGGGTGAGTTTTGGTATGATCTCTTGCTCAAGGCAACCACTCCTCAACCTTCACATCTTCCCTCGGTTCACTGCGAGATTGGCAAGTCCACTTATCAGATGATTCGCCTTCACAATCCAACAGACGAGTCACTCGTTCTCATTCCTCATTGCTCAAACCCAGCTAACTTCAGTTTGGAGTTGGACAATACTAAACAGATTCTCTTACCATCAGCTGGTTTGCTAGAAATTCCACTTAAATTTACGCCATCTGCTATTGGACAACTGCATTCTGCCGAAATTTCCTTCCAATGCCCTCAGCTCGGTAGATGGGTTTTCCTTGCTGCTGGTACCGGGATGATGCCAGGACCAGTAGATCCTATCAATATCTATTCACAGCTTGGAAGTAACTCTTCAGTTATAATTCCGTTTAAAAACCCCACTGAGCGTCAAGTGATGGTGGATGTGGTTATGAAGGAGCGCCTGTTGTCTAGGAGTGGCTCCTTGTTCACAACCTTACGCGGCAGTGACAGCCAACCTAAAGATTCGGTATTCTGTCTCCTGCTTAAACGCGCTAAGAGTATCCTCTTGGAGCCTGGTGCTACTCTAGATATCCCGATCTCCTTTGCGCCCGACACCATGGAGCTGCATGAAGCCACAGTCACTGTGACTGTCCATAGAGATACGGAGGACACGTGGGACGGGAACTACCCAAGCATGATGAGCACGCGCATGGTGAATGATCTTCACTGGATCTACCCCGTCAGGGGTATCCCCGAGTCTCATCCTATAAAAGACTCTCAGGCCCCTTGTATCGAGTGCAAGGCTCGGAGTCGAGTGGAAGAGAGAGTTGAGATAACGCTGACCGGTCTGGCTCCCAATACAGGCTCAGGTTTTGGGAGGTACCCTAGCGTTACTCCCATCAGTCTTTTAGGGCGACATGTGCCTGGAGAAATGGAATATGGAGTGGACTACTTGAACGTGCCAGAAGAGTTTAGGTACGAACTTATTTACGACGACGCAGAATGCCAGTCGTGTCTTGAACGATCCCTGGGCGTGAGTCTGTTGAGAAAGATCAAGAATCAAGTGTCAGGAGTGGTGATTCTTCTGTTCAATTTCGTCTTTTCACCATTCAAGCCGTTTAGCCACAAGACTCAGTTAATGATATCGGCGGCTTCTGGTGGAGTATGGAGATTTCCTCTAAGAGTGTTAGCCACTGAACCAGAAGTGGACGATACGATCACGATCGAGTCTGTTGGACTGAACAAAGAATCTGTTGTTGGCTTCAGGATGACAAGTCAGATGAGACACACTCTTGCATTTGAAGCATTTTTTACTCCCAATTCTGACATGGAGTTTACAGTCACTCCTACATCCGGGGAACTAACTCCGGCAGGTACCGAAGGGACACTTATTAGGGTGGCGTACAAGCCCCAAATATACGGCAAAACCCACAAGGCTAAACTGGTGGTTCAGACCTTAGACGTGCAGTGGACGTATGACATCATTGGCACAACCGCTGACTATAGCCCGCCTAACATGCGGTCGAAAATTGTCTCCACTAGCGCCAACTCCTCACGCCGAGCTGTGAAGCAAAAGAAAAACTACATACTCGATAACTTGAAGCTGCAAAGCACGGCAGTATCGTCTCCATACAAGGGAGTTAGACTGGTCTCGCGTTCAGCCAGATAA

Transcript

evm.model.contig_31338.2

ATGCCATGCGTAACCCCCAACCGTCCTCCCACAATAGCTTCCACTAGTGCAACAAGCACGAGCTTTGGAATCAGCACCTCAACATATCCTGAGTCTAGTAATGAGGCCACATCCTCCACTTACCCCTCCACGCCCCATCATGGGGACTCACAGCATGGGGGCCCTGCTCGAGGGGTCTCTGATGGATCTGAAACAAATGGGACCTTTGTTTTGGGACCTGGAGTTGAAAGTGATGAAAGAAAGTTCATTAGAAAAGTCGTTACTGCCGTGCAGAGGTACTTGTCATCACAGGCCTGGTCTGGTGGACCCTACCCAATAGCCATACCTCAGACCTTACGAGCAGCTCTCCAAGACACAAGTGATCCCCAGATGGGTGGTACAGGGGCTGCAAGGACATCTAACTGGGATAACAATTCCAAAAAAGAATTGAGATCCGTGTTTGATCTTGTCGGTCATCTGTGTGGTCGCTCAGTGCCAGGAATTCCACTAGCCTCCACTCTCCCAACATGTCCTGTTGACCGTGTGCGTCAGATCCACTGGATGTACTCCACACTGCTTACTTTCTTGAGAACGCAAGGTGCAATGATGTCTCATGTCAAACCAGAACACTTACTAGATTATACTGATTATCGCCGCTGGCAGAAAATCCATCGAAAACTCACAGGAACGAATGAAGAAGACTTTCTTAGTGATAGCAGCGCTAGCAAATTTGAGTTAGCTCAATTTGAAGCCATCTCAGCTCAGGCGTGGACTCACATCCTGTGTCAGCTTATCAAGGTCTTGATACTGAGCCGTATCACCCCACATCAGTTTAAAAAGCTTCAGTTTCCCAACAAGAGCGTTCATTTGCCAGACGTGAATCCCGATCCGCTGACCAGCAATGTTTATAGTGTGGGAGAGCGGATCTTGCTAGCATGGATCAATCATCACTATAACATTCAGAGGAACATCAACTGGCCTGCTGCTATTGGCGGTTCCAGCCCTCCATGTCGATGGATTGTGAACTTTGATGTTGATTTTATGGATGGACTGGTACTAGCTGCTCTTGTGAGCGCGCATGTTCCATTTGTTATTTCAACCCATCTGTACTCCATGTACACTCGTCCCAGTAAAGCCGAGCAGTGCCTTCATAATGTACTCAAAGTTGTTGAAGCTCTCAGACATATAGGCTTGGACTATGACATCCAGCCAACAGACCTGACGGAACCCAACCCAATCACAATTCTCCTGTTATGTATTCATCTGTATCAGCGGCTGCCTCACTACTTGCCACGCGCAACTGTTGCATTTGAAGGTCCGCTACACGACACGGTAACAAAACAtGTTCGACTTCAGAATCCTAGTACCAAGCCACTAGTGTATCAGGTTCTTTTGGCGGGAAGAGATGCTGCCGACTTTCGACTTCCAATGGGAGACACAATACAGGTTCCGCCTAAAGGACACCTTCAGATGCCAGTAGAGTTCAAGAGCCGTTTTCTCAGACCGTGTAGTGGAACATTAGTTCTTGTTGGGAAACGAGAAGGAAGTCCATGTGGAAACACTCTTGTATTTTCCTTAGATACTTGCATCACCAACATTGTTCCTGTGGCAACAATTAAAAGCGAGTCAGCATGCTACGAACTTCAGAAGGTGAATTTTGACGTCACTAATCCATTCCCGCTGACTGGAGAGTTCCGTATCGTGTTGGTAGAAGCTCGGAATTCATTTCCCGGCTCCTCGCTGCCGAAACCAAAGCTCTCCAAATCCAACAAGAATTTAAAGAAAGTGGAGTCAAGAACAGATCACGGGCAAATTAACAAATCACCGAGAAGAGACTTTCCACCCAAAATTGAACAACAAAAGACTGAGTCAGTAACAGTTCCTCCAGGTCCTATGCTAAGCGCCTTCTGGTGTCCTTCCAGTACAATTCATCTTGAGGCCAACAGCTCAGGAGAAGTGGAAATCCAGTTTTTACCTTTTGATGTCGGTCATAGGCAGTGCTCGATTCTCTTTATAAACGATAAGATTGGCGAGTTTCTCTATTGCATTGAAGCAAACGccaccctccccctcccctccccgaTGCCCGTTGCCGAGTCCCCCCATAGCATACGGATTAGCAGTGCTGCAGCAGCCAGGAGCGGTAGGGGGGCGTTCGGCGGGAATGAGAGAGTGGTGTACTGGAAATGCGAACATAACGAGTCATTTACGGAAGATTTGTACATTCCGCTCGTGAATGAGGCAAGGGAGAATGCTTTAGCAATCGCCGCTCAACAGCGCATGTCAGAGAAGGAGCTACAACGCCGAAAGCTGACAGGTACGCTGGCCAGTTGTACCGTCACTGCAAGCGTGACAGCACTGGGTCTAGGAGGGGATAAATTCTTGCACCCTGGTGACACCAACACTAAGAGGGACTTTGAAAAAGCGATCACGGAGTTCCAAACAGAACTGAGCTCCAAGTTCTTTCGGGCTCCTTCTCAACTCATCATCCCAGCGAGTAACAGCGGAAAGAACGGTGAGTCGATCTCTGCCGCAGTCAAGTCCAGGCCACTACGTGATACAGTTCCATTACCAGTGCTATTCCAGCCCAAAGGACCTGGACACTACCCATGTCAAATTACTCTAAAATCTGCGTATGACATAAGAGTGTATCAGCTAGAATGTACTGTGTGTCCTGAGGGCTCAGTTCTAGAGCTGGATTTCATCACGCCAACACATCAGTCAGTAACGCAGGATATACCTGTGGTCAACCAAACTAATCAGGACTGGAATTTGACGGCAACTTTAGAGGGGGAGGGGTTCTATGGTCCACCTGTAATGGTTGCAAAATCTCACCTCACTTCCAACTACCCCCTGATGTTTAAACCTTGTTACGAGGGACCAGTGGAGGGTAAGCTAGTGCTGACAAACACTTTAGATGGCACAGAGCAGGTCTACAGGCTTCTAGGAACAGGACAAAAACCGCTTCCTCTAGATCACATCTTGATAGAGTGTCCTGCCAAACAAAGTGCCACTTACACTCTGAGAGTTCCGAATGTAACGAAAAGTAAACTCACCTTCCAGGTCAAGACCGACCTTGATATCTTGAGTGGTCCATCGTCGGTCACAGTCCTCCCCGGAAAGACAGCCGAGCACGTGATCACCATTTCACCCTGGAAACGAGGCACGTCCACTGGAATTATTTCATTCGAAACCTCCGCGGAGCCCTCAGGCAGTTCTGACGCGCCAAGAGTTGAAGGCTATGACGAAAATCTGAATAACAGAAAGTCCCCTACCAACGATACTCAAGCTCGTTTGTCCCAGGAGCTCACAGGTGATCTCAGACGCCAACCTTACCGTTTGTGGTACACGATAGAAGTTCAATCCTCAGCACCCAATCCTGAGCGGACCCTGGAGGTAACATGTGCAGCACATTCGGTAGTCGCAGTCGACATAGCAGTGACTAACCCTACCCGAGAGAGGATTGTCATGGACGTACTAATTGATGGCGTGGCCCTGTCTGGTGAGCCCGCAATCACTCTGCACCCTCGACAGCAAGTTATATATCAAGTCAGATTTGCCCCGACGGTGATCGGCGAATATACTGGCAGTGTGATTTTCCAGCATGAATCAGTGGGTGAGTTTTGGTATGATCTCTTGCTCAAGGCAACCACTCCTCAACCTTCACATCTTCCCTCGGTTCACTGCGAGATTGGCAAGTCCACTTATCAGATGATTCGCCTTCACAATCCAACAGACGAGTCACTCGTTCTCATTCCTCATTGCTCAAACCCAGCTAACTTCAGTTTGGAGTTGGACAATACTAAACAGATTCTCTTACCATCAGCTGGTTTGCTAGAAATTCCACTTAAATTTACGCCATCTGCTATTGGACAACTGCATTCTGCCGAAATTTCCTTCCAATGCCCTCAGCTCGGTAGATGGGTTTTCCTTGCTGCTGGTACCGGGATGATGCCAGGACCAGTAGATCCTATCAATATCTATTCACAGCTTGGAAGTAACTCTTCAGTTATAATTCCGTTTAAAAACCCCACTGAGCGTCAAGTGATGGTGGATGTGGTTATGAAGGAGCGCCTGTTGTCTAGGAGTGGCTCCTTGTTCACAACCTTACGCGGCAGTGACAGCCAACCTAAAGATTCGGTATTCTGTCTCCTGCTTAAACGCGCTAAGAGTATCCTCTTGGAGCCTGGTGCTACTCTAGATATCCCGATCTCCTTTGCGCCCGACACCATGGAGCTGCATGAAGCCACAGTCACTGTGACTGTCCATAGAGATACGGAGGACACGTGGGACGGGAACTACCCAAGCATGATGAGCACGCGCATGGTGAATGATCTTCACTGGATCTACCCCGTCAGGGGTATCCCCGAGTCTCATCCTATAAAAGACTCTCAGGCCCCTTGTATCGAGTGCAAGGCTCGGAGTCGAGTGGAAGAGAGAGTTGAGATAACGCTGACCGGTCTGGCTCCCAATACAGGCTCAGGTTTTGGGAGGTACCCTAGCGTTACTCCCATCAGTCTTTTAGGGCGACATGTGCCTGGAGAAATGGAATATGGAGTGGACTACTTGAACGTGCCAGAAGAGTTTAGGTACGAACTTATTTACGACGACGCAGAATGCCAGTCGTGTCTTGAACGATCCCTGGGCGTGAGTCTGTTGAGAAAGATCAAGAATCAAGTGTCAGGAGTGGTGATTCTTCTGTTCAATTTCGTCTTTTCACCATTCAAGCCGTTTAGCCACAAGACTCAGTTAATGATATCGGCGGCTTCTGGTGGAGTATGGAGATTTCCTCTAAGAGTGTTAGCCACTGAACCAGAAGTGGACGATACGATCACGATCGAGTCTGTTGGACTGAACAAAGAATCTGTTGTTGGCTTCAGGATGACAAGTCAGATGAGACACACTCTTGCATTTGAAGCATTTTTTACTCCCAATTCTGACATGGAGTTTACAGTCACTCCTACATCCGGGGAACTAACTCCGGCAGGTACCGAAGGGACACTTATTAGGGTGGCGTACAAGCCCCAAATATACGGCAAAACCCACAAGGCTAAACTGGTGGTTCAGACCTTAGACGTGCAGTGGACGTATGACATCATTGGCACAACCGCTGACTATAGCCCGCCTAACATGCGGTCGAAAATTGTCTCCACTAGCGCCAACTCCTCACGCCGAGCTGtgaagcaaaagaaaaactacATACTCGATAACTTGAAGCTGCAAAGCACGGCAGTATCGTCTCCATACAAGGGAGTTAGACTGGTCTCGCGTTCAGCCAGATAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45912 all species →	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_31338.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.