Detailed information of evm.model.contig_33625.6 in Platygyra sinensis

Genomic Location: contig_33625:49774...74441
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443
all species →
UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF14836
all species →
Ubiquitin_3Ubiquitin-like domainDomainInterproscan
PF14533
all species →
USP7_C2Ubiquitin-specific protease C-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018200
all species →
Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR028889
all species →
DomainUbiquitin specific protease domainInterproscan
IPR050185
all species →
FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR001394
all species →
DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028135
all species →
DomainUbiquitin-like domain, USP-typeInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR029346
all species →
DomainUbiquitin carboxyl-terminal hydrolase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646
all species →
UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →
Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →
Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_33625.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP