Detailed information of evm.model.contig_34276.5 in Platygyra sinensis

Genomic Location: contig_34276:28890...43389
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01175
all species →
UrocanaseUrocanase Rossmann-like domainDomainInterproscan
PF17392
all species →
Urocanase_CUrocanase C-terminal domainDomainInterproscan
PF17391
all species →
Urocanase_NUrocanase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036190
all species →
Homologous_superfamilyUrocanase superfamilyInterproscan
IPR035085
all species →
DomainUrocanase, Rossmann-like domainInterproscan
IPR010998
all species →
Homologous_superfamilyIntegrase/recombinase, N-terminalInterproscan
IPR011010
all species →
Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR023636
all species →
Conserved_siteUrocanase conserved siteInterproscan
IPR023637
all species →
FamilyUrocanaseInterproscan
IPR013762
all species →
Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR035401
all species →
DomainUrocanase, C-terminal domainInterproscan
IPR038364
all species →
Homologous_superfamilyUrocanase, central domain superfamilyInterproscan
IPR035400
all species →
DomainUrocanase, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12216
all species →
UROCANATE HYDRATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0016153
all species →
Molecular Functionurocanate hydratase activityInterproscan
GO:0006548
all species →
Biological ProcessL-histidine catabolic processInterproscan
GO:0006310
all species →
Biological ProcessDNA recombinationInterproscan
GO:0015074
all species →
Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_34276.5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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