Gene detail

Detailed information of evm.model.contig_34375.6 in Platygyra sinensis

Genomic Location: contig_34375:22660...29245
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00390 all species →	malic	Malic enzyme, N-terminal domain	Domain	Interproscan
PF03949 all species →	Malic_M	Malic enzyme, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012301 all species →	Domain	Malic enzyme, N-terminal domain	Interproscan
IPR001891 all species →	Family	Malic oxidoreductase	Interproscan
IPR012302 all species →	Domain	Malic enzyme, NAD-binding	Interproscan
IPR046346 all species →	Homologous_superfamily	Aminoacid dehydrogenase-like, N-terminal domain superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR037062 all species →	Homologous_superfamily	Malic enzyme, N-terminal domain superfamily	Interproscan
IPR015884 all species →	Conserved_site	Malic enzyme, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23406 all species →	MALIC ENZYME-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004470 all species →	Molecular Function	malic enzyme activity	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0004473 all species →	Molecular Function	malate dehydrogenase (decarboxylating) (NADP+) activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006090 all species →	Biological Process	pyruvate metabolic process	Interproscan
GO:0006108 all species →	Biological Process	malate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_34375.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.