Gene detail

Detailed information of evm.model.contig_34555.2 in Platygyra sinensis

Genomic Location: contig_34555:10447...16531
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01063 all species →	Aminotran_4	Amino-transferase class IV	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005786 all species →	Family	Branched-chain amino acid aminotransferase II	Interproscan
IPR018300 all species →	Conserved_site	Aminotransferase, class IV, conserved site	Interproscan
IPR033939 all species →	Family	Branched-chain aminotransferase	Interproscan
IPR036038 all species →	Homologous_superfamily	Aminotransferase-like, PLP-dependent enzymes	Interproscan
IPR001544 all species →	Family	Aminotransferase class IV	Interproscan
IPR043131 all species →	Homologous_superfamily	Branched-chain-amino-acid aminotransferase-like, N-terminal	Interproscan
IPR043132 all species →	Homologous_superfamily	Branched-chain-amino-acid aminotransferase-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11825 all species →	SUBGROUP IIII AMINOTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004084 all species →	Molecular Function	branched-chain-amino-acid transaminase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0009081 all species →	Biological Process	branched-chain amino acid metabolic process	Interproscan
GO:0009098 all species →	Biological Process	L-leucine biosynthetic process	Interproscan
GO:0009099 all species →	Biological Process	L-valine biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_34555.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.