Gene detail

Detailed information of evm.model.contig_34557.12 in Platygyra sinensis

Genomic Location: contig_34557:104034...110348
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21041 all species →	XMAP215_CLASP_TOG	XMAP215/Dis1/CLASP, TOG domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR048491 all species →	Domain	XMAP215/Dis1/CLASP, TOG domain	Interproscan
IPR034085 all species →	Domain	TOG domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR045110 all species →	Family	XMAP215	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12609 all species →	MICROTUBULE ASSOCIATED PROTEIN XMAP215	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007051 all species →	Biological Process	spindle organization	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0030951 all species →	Biological Process	establishment or maintenance of microtubule cytoskeleton polarity	Interproscan
GO:0035371 all species →	Cellular Component	microtubule plus-end	Interproscan
GO:0046785 all species →	Biological Process	microtubule polymerization	Interproscan
GO:0051010 all species →	Molecular Function	microtubule plus-end binding	Interproscan
GO:0051298 all species →	Biological Process	centrosome duplication	Interproscan
GO:0061863 all species →	Molecular Function	microtubule plus end polymerase	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_34557.12.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.