Gene detail

Detailed information of evm.model.contig_35456.1 in Platygyra sinensis

Genomic Location: contig_35456:2137...8266
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04886 all species →	PT	PT repeat	Repeat	Interproscan
PF00088 all species →	Trefoil	Trefoil (P-type) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000519 all species →	Domain	P-type trefoil domain	Interproscan
IPR044913 all species →	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan
IPR006970 all species →	Repeat	PT repeat	Interproscan
IPR017994 all species →	Family	P-type trefoil, chordata	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13826 all species →	INTESTINAL TREFOIL FACTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_35456.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.