Detailed information of evm.model.contig_35988.1 in Platygyra sinensis

Genomic Location: contig_35988:7931...11245
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08711
all species →		Med26TFIIS helical bundle-like domainDomainInterproscan
PF07500
all species →		TFIIS_MTranscription factor S-II (TFIIS), central domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017923
all species →		DomainTranscription factor IIS, N-terminalInterproscan
IPR003617
all species →		DomainTranscription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeInterproscan
IPR036575
all species →		Homologous_superfamilyTranscription elongation factor S-II, central domain superfamilyInterproscan
IPR003618
all species →		DomainTranscription elongation factor S-II, central domainInterproscan
IPR035441
all species →		Homologous_superfamilyTFIIS/LEDGF domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11477
all species →		TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_35988.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP