Detailed information of evm.model.contig_36128.6 in Platygyra sinensis

Genomic Location: contig_36128:54737...63748
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008411 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for evm.model.contig_36128.6 in Platygyra sinensis.
 InterPro
InterPro termTypeDescriptionSource
IPR039673
all species →		FamilyDNA-binding protein SATB1/SATB2Interproscan
IPR032355
all species →		DomainSATB, CUT1-like DNA-binding domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR038216
all species →		Homologous_superfamilySATB, CUTL domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15116
all species →		DNA-BINDING PROTEIN SATB FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_36128.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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