Gene detail

Detailed information of evm.model.contig_39457.1 in Platygyra sinensis

Genomic Location: contig_39457:311...13894
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05066 all species →	HARE-HTH	HB1, ASXL, restriction endonuclease HTH domain	Family	Interproscan
PF13919 all species →	ASXH	Asx homology domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007759 all species →	Domain	ASXL, HARE-HTH domain	Interproscan
IPR044867 all species →	Domain	DEUBAD domain	Interproscan
IPR028020 all species →	Domain	ASX, DEUBAD domain	Interproscan
IPR024811 all species →	Family	Polycomb protein ASX/ASX-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13578 all species →	ADDITIONAL SEX COMBS LIKE PROTEIN ASXL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0009887 all species →	Biological Process	animal organ morphogenesis	Interproscan
GO:0035517 all species →	Cellular Component	PR-DUB complex	Interproscan
GO:0042975 all species →	Molecular Function	peroxisome proliferator activated receptor binding	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_39457.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.