Gene detail

Detailed information of evm.model.contig_40234.4 in Platygyra sinensis

Genomic Location: contig_40234:30959...45294
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR051184 all species →	Family	Tyrosine-phosphorylated adapter molecule	Interproscan
IPR035023 all species →	Domain	PLC-gamma, C-terminal SH2 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19969 all species →	SH2-SH3 ADAPTOR PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0030971 all species →	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0035591 all species →	Molecular Function	signaling adaptor activity	Interproscan
GO:0036493 all species →	Biological Process	positive regulation of translation in response to endoplasmic reticulum stress	Interproscan
GO:1902237 all species →	Biological Process	positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway	Interproscan
GO:1903898 all species →	Biological Process	negative regulation of PERK-mediated unfolded protein response	Interproscan
GO:1903912 all species →	Biological Process	negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_40234.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.