Detailed information of evm.model.contig_41001.3 in Platygyra sinensis

Genomic Location: contig_41001:39983...46411
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12542
all species →		CWC25Pre-mRNA splicing factorFamilyInterproscan
PF10197
all species →		Cir_NN-terminal domain of CBF1 interacting co-repressor CIRDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR023211
all species →		Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR019339
all species →		DomainCBF1-interacting co-repressor CIR, N-terminal domainInterproscan
IPR051376
all species →		FamilyPre-mRNA-splicing factor CWC25Interproscan
IPR022209
all species →		FamilyPre-mRNA splicing factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16196
all species →		CELL CYCLE CONTROL PROTEIN CWF25Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005684
all species →		Cellular ComponentU2-type spliceosomal complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_41001.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP