Gene detail

Detailed information of evm.model.contig_41214.2 in Platygyra sinensis

Genomic Location: contig_41214:6389...14925
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02310 all species →	B12-binding	B12 binding domain	Domain	Interproscan
PF01642 all species →	MM_CoA_mutase	Methylmalonyl-CoA mutase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006158 all species →	Domain	Cobalamin (vitamin B12)-binding domain	Interproscan
IPR006159 all species →	Domain	Methylmalonyl-CoA mutase, C-terminal	Interproscan
IPR036724 all species →	Homologous_superfamily	Cobalamin-binding domain superfamily	Interproscan
IPR006099 all species →	Domain	Methylmalonyl-CoA mutase, alpha/beta chain, catalytic	Interproscan
IPR016176 all species →	Homologous_superfamily	Cobalamin (vitamin B12)-dependent enzyme, catalytic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48101 all species →	METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031419 all species →	Molecular Function	cobalamin binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0016853 all species →	Molecular Function	isomerase activity	Interproscan
GO:0004494 all species →	Molecular Function	methylmalonyl-CoA mutase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0019678 all species →	Biological Process	propionate metabolic process, methylmalonyl pathway	Interproscan
GO:0016866 all species →	Molecular Function	intramolecular transferase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_41214.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.