Detailed information of evm.model.contig_42162.1 in Platygyra sinensis

Genomic Location: contig_42162:727...7101
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07676
all species →		PD40WD40-like Beta Propeller RepeatRepeatInterproscan
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR011659
all species →		RepeatWD40-like beta propellerInterproscan
IPR045139
all species →		FamilyAladinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14494
all species →		ALADIN/ADRACALIN/AAASInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0006913
all species →		Biological Processnucleocytoplasmic transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_42162.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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