Detailed information of evm.model.contig_42183.3 in Platygyra sinensis

Genomic Location: contig_42183:21137...29273
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04157
all species →		EAP30EAP30/Vps36 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR040608
all species →		FamilySnf8/Vps36 familyInterproscan
IPR037855
all species →		FamilyVacuolar protein sorting protein 36Interproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13128
all species →		VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000814
all species →		Cellular ComponentESCRT II complexInterproscan
GO:0031902
all species →		Cellular Componentlate endosome membraneInterproscan
GO:0032509
all species →		Biological Processendosome transport via multivesicular body sorting pathwayInterproscan
GO:0043130
all species →		Molecular Functionubiquitin bindingInterproscan
GO:0043328
all species →		Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_42183.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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