Detailed information of evm.model.contig_42428.3 in Platygyra sinensis

Genomic Location: contig_42428:17046...25500
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08646
all species →		Rep_fac-A_CReplication factor-A C terminal domainFamilyInterproscan
PF00612
all species →		IQIQ calmodulin-binding motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013955
all species →		DomainReplication factor A, C-terminalInterproscan
IPR000048
all species →		Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.contig_42428.3. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_42428.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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