Detailed information of evm.model.contig_43796.6 in Platygyra sinensis

Genomic Location: contig_43796:43578...46794
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002769 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08652
all species →		RAI1RAI1 like PD-(D/E)XK nucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013961
all species →		DomainRAI1-likeInterproscan
IPR039039
all species →		FamilyRAI1-like familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12395
all species →		DOM-3 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000956
all species →		Biological Processnuclear-transcribed mRNA catabolic processInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0034353
all species →		Molecular FunctionmRNA 5'-diphosphatase activityInterproscan
GO:0090305
all species →		Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan
GO:0110155
all species →		Biological ProcessNAD-cap decappingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_43796.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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