Genomic Location: contig_46534:4621...26871
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families
| CDS |
| evm.model.contig_46534.3 |
| Transcript |
| evm.model.contig_46534.3 |
| Protein |
| evm.model.contig_46534.3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07727 all species → | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | Family | Interproscan |
| PF14223 all species → | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036875 all species → | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR001878 all species → | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR038830 all species → | Family | Coiled-coil domain-containing protein 186 | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR013103 all species → | Domain | Reverse transcriptase, RNA-dependent DNA polymerase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18911 all species → | CTCL TUMOR ANTIGEN HD-CL-01 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0005802 all species → | Cellular Component | trans-Golgi network | Interproscan |
| GO:0031267 all species → | Molecular Function | small GTPase binding | Interproscan |
| GO:0099518 all species → | Biological Process | vesicle cytoskeletal trafficking | Interproscan |
evm.model.contig_46534.3.
