Detailed information of evm.model.contig_47049.4 in Platygyra sinensis

Genomic Location: contig_47049:20522...24935
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyULD|UFD|DWNN · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08783
all species →		DWNNDWNN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014891
all species →		DomainDWNN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15439
all species →		RETINOBLASTOMA-BINDING PROTEIN 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_47049.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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