Gene detail

Detailed information of evm.model.contig_47377.5 in Platygyra sinensis

Genomic Location: contig_47377:65565...75964
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan
PF15396 all species →	FAM60A	Protein Family FAM60A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026065 all species →	Family	SIN3-HDAC complex-associated factor	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13422 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016580 all species →	Cellular Component	obsolete Sin3 complex	Interproscan
GO:0030336 all species →	Biological Process	negative regulation of cell migration	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_47377.5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.