Detailed information of evm.model.contig_47924.1 in Platygyra sinensis

Genomic Location: contig_47924:4313...19692
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16563
all species →		P66_CCCoiled-coil and interaction region of P66A and P66B with MBD2Coiled-coilInterproscan
PF10345
all species →		Cohesin_loadCohesin loading factorRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR040386
all species →		FamilyTranscriptional repressor p66Interproscan
IPR032346
all species →		DomainTranscriptional repressor p66, coiled-coil MBD2-interaction domainInterproscan
IPR019440
all species →		FamilyChromatid cohesion factor MAU2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13455
all species →		TRANSCRIPTIONAL REPRESSOR P66-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0016581
all species →		Cellular ComponentNuRD complexInterproscan
GO:0007064
all species →		Biological Processmitotic sister chromatid cohesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_47924.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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