Detailed information of evm.model.contig_48261.5 in Platygyra sinensis

Genomic Location: contig_48261:26721...28690
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000403 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00229
all species →		TNFTNF(Tumour Necrosis Factor) family DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008983
all species →		Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR006052
all species →		DomainTumour necrosis factor domainInterproscan
IPR051748
all species →		FamilyTumor Necrosis Factor Ligand SuperfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15151
all species →		PROTEIN EIGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005164
all species →		Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955
all species →		Biological Processimmune responseInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0048018
all species →		Molecular Functionreceptor ligand activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_48261.5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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