Detailed information of evm.model.contig_48584.3 in Platygyra sinensis

Genomic Location: contig_48584:11784...21983
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007227 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF20049
all species →		DUF6451Domain of unknown function (DUF6451)DomainInterproscan
PF07004
all species →		SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033557
all species →		FamilyCiliary microtubule-associated protein 2Interproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR045609
all species →		DomainDomain of unknown function DUF6451Interproscan
IPR010736
all species →		RepeatSperm-tail PG-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34914
all species →		LYMPHOCYTE EXPANSION MOLECULEInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for evm.model.contig_48584.3 in Platygyra sinensis.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_48584.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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