Gene detail

Detailed information of evm.model.contig_48644.2 in Platygyra sinensis

Genomic Location: contig_48644:24694...29770
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10174 all species →	Cast	RIM-binding protein of the cytomatrix active zone	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019323 all species →	Family	Active zone protein ELKS	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18861 all species →	ELKS/RAB6-INTERACTING/CAST PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007274 all species →	Biological Process	neuromuscular synaptic transmission	Interproscan
GO:0048167 all species →	Biological Process	regulation of synaptic plasticity	Interproscan
GO:0048788 all species →	Cellular Component	cytoskeleton of presynaptic active zone	Interproscan
GO:0048790 all species →	Biological Process	maintenance of presynaptic active zone structure	Interproscan
GO:0098882 all species →	Molecular Function	structural constituent of presynaptic active zone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06679	MAD1; mitotic spindle assembly checkpoint protein MAD1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.